Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glucose-6-phosphate 1-epimerase | PDPJ_1_00460 | Not Available | Positive | 410730 - 411605 | 32700.4 |
| hypothetical protein | PDPJ_1_00461 | Not Available | Negative | 411694 - 411870 | 6249.52 |
| hypothetical protein | PDPJ_1_00462 | Not Available | Negative | 411940 - 412074 | 5057.05 |
| prka aaa domain protein | PDPJ_1_00463 | Not Available | Positive | 412734 - 414668 | 74400.2 |
| hypothetical protein | PDPJ_1_00464 | Not Available | Positive | 414719 - 415990 | 48759.3 |
| spovr family protein | PDPJ_1_00465 | Not Available | Positive | 416077 - 417606 | 60329.4 |
| fatty acid metabolism regulator protein | PDPJ_1_00466 | Not Available | Negative | 417690 - 418541 | 32794.2 |
| na(+)/h(+) antiporter nhab | PDPJ_1_00467 | Not Available | Positive | 419138 - 420727 | 57627.8 |
| disulfide bond formation protein b | PDPJ_1_00468 | Not Available | Positive | 420948 - 421469 | 19884.6 |
| hypothetical protein | PDPJ_1_00469 | Not Available | Negative | 421548 - 422171 | 23134.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

