Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase | PDPJ_1_00450 | Not Available | Negative | 398055 - 399089 | 36335.6 |
| putative nad(p)h nitroreductase ydja | PDPJ_1_00451 | Not Available | Negative | 399290 - 399838 | 19814.9 |
| 2,4-dienoyl-coa reductase | PDPJ_1_00452 | Not Available | Negative | 399904 - 401916 | 73311.4 |
| protease 4 | PDPJ_1_00453 | Not Available | Positive | 402177 - 404030 | 67402.6 |
| l-asparaginase 1 | PDPJ_1_00454 | Not Available | Positive | 404298 - 405311 | 36930.5 |
| hypothetical protein | PDPJ_1_00455 | Not Available | Negative | 405388 - 405672 | 10771.9 |
| hypothetical protein | PDPJ_1_00456 | Not Available | Positive | 405875 - 406714 | 32729.9 |
| group ii intron-encoded protein ltra | PDPJ_1_00457 | Not Available | Negative | 406791 - 408101 | 50341.0 |
| peptide methionine sulfoxide reductase msrb | PDPJ_1_00458 | Not Available | Negative | 408678 - 409073 | 14820.1 |
| glyceraldehyde-3-phosphate dehydrogenase a | PDPJ_1_00459 | Not Available | Positive | 409411 - 410406 | 35219.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

