Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00430 | Not Available | Negative | 384585 - 384812 | 8788.0 |
| hypothetical protein | PDPJ_1_00431 | Not Available | Positive | 384920 - 385195 | 10458.7 |
| transposase | PDPJ_1_00432 | Not Available | Positive | 385404 - 385700 | 11162.5 |
| integrase core domain protein | PDPJ_1_00433 | Not Available | Positive | 385835 - 386548 | 27660.3 |
| hypothetical protein | PDPJ_1_00434 | Not Available | Negative | 386772 - 386915 | 5606.18 |
| hypothetical protein | PDPJ_1_00435 | Not Available | Negative | 386866 - 388110 | 46867.2 |
| hypothetical protein | PDPJ_1_00436 | Not Available | Negative | 388128 - 388508 | 14486.3 |
| hypothetical protein | PDPJ_1_00437 | Not Available | Positive | 388605 - 388880 | 10458.7 |
| hypothetical protein | PDPJ_1_00438 | Not Available | Positive | 388929 - 389150 | 8291.33 |
| hypothetical protein | PDPJ_1_00439 | Not Available | Negative | 389307 - 389486 | 6680.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

