Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | PDPJ_1_00420 | Not Available | Negative | 373936 - 374949 | 38361.0 |
| hypothetical protein | PDPJ_1_00421 | Not Available | Positive | 375026 - 375244 | 7888.57 |
| inner membrane protein yejm | PDPJ_1_00422 | Not Available | Positive | 375292 - 377160 | 71440.2 |
| hypothetical protein | PDPJ_1_00423 | Not Available | Negative | 377201 - 377461 | 10219.8 |
| phytochrome-like protein cph2 | PDPJ_1_00424 | Not Available | Positive | 377712 - 379334 | 62760.7 |
| dna topoisomerase 3 | PDPJ_1_00425 | Not Available | Negative | 379376 - 381019 | 60949.2 |
| hypothetical protein | PDPJ_1_00426 | Not Available | Positive | 381224 - 381499 | 10458.7 |
| hypothetical protein | PDPJ_1_00427 | Not Available | Positive | 381548 - 381769 | 8291.33 |
| dna topoisomerase 3 | PDPJ_1_00428 | Not Available | Negative | 382208 - 384115 | 71118.0 |
| hypothetical protein | PDPJ_1_00429 | Not Available | Negative | 384115 - 384576 | 17770.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

