Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00410 | Not Available | Negative | 362970 - 363245 | 10458.7 |
| hypothetical protein | PDPJ_1_00411 | Not Available | Negative | 363288 - 363929 | 24221.3 |
| hypothetical protein | PDPJ_1_00412 | Not Available | Negative | 363933 - 364457 | 20660.4 |
| phage-related baseplate assembly protein | PDPJ_1_00413 | Not Available | Negative | 364448 - 366520 | 76548.7 |
| major exported protein | PDPJ_1_00414 | Not Available | Negative | 366635 - 367153 | 19127.6 |
| hypothetical protein | PDPJ_1_00415 | Not Available | Negative | 367403 - 367495 | 3715.54 |
| hydroxylamine reductase | PDPJ_1_00416 | Not Available | Positive | 367560 - 368627 | 38732.3 |
| hydroxylamine reductase | PDPJ_1_00417 | Not Available | Positive | 368651 - 368902 | 9167.22 |
| pyruvate-flavodoxin oxidoreductase | PDPJ_1_00418 | Not Available | Positive | 369063 - 372620 | 130589.0 |
| flavodoxin | PDPJ_1_00419 | Not Available | Positive | 372632 - 373120 | 17883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

