Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00400 | Not Available | Positive | 350219 - 352615 | 84595.5 |
| putative peroxiredoxin | PDPJ_1_00401 | Not Available | Negative | 352699 - 353304 | 22228.3 |
| na+/h+ antiporter family protein | PDPJ_1_00402 | Not Available | Positive | 353597 - 354919 | 45949.8 |
| rho-binding antiterminator | PDPJ_1_00403 | Not Available | Positive | 355058 - 355339 | 10866.1 |
| group ii intron-encoded protein ltra | PDPJ_1_00404 | Not Available | Negative | 355427 - 356737 | 50383.0 |
| glutaredoxin-4 | PDPJ_1_00405 | Not Available | Negative | 357340 - 357669 | 12190.8 |
| superoxide dismutase | PDPJ_1_00406 | Not Available | Positive | 358178 - 358762 | 21484.1 |
| aspartate-semialdehyde dehydrogenase 1 | PDPJ_1_00407 | Not Available | Negative | 358934 - 360052 | 40488.8 |
| malate-2h(+)/na(+)-lactate antiporter | PDPJ_1_00408 | Not Available | Positive | 360758 - 362206 | 51149.7 |
| hypothetical protein | PDPJ_1_00409 | Not Available | Negative | 362700 - 362921 | 8291.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

