Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex protein rnfd | PDPJ_1_00390 | Not Available | Positive | 341936 - 342985 | 37852.2 |
| electron transport complex protein rnfg | PDPJ_1_00391 | Not Available | Positive | 342994 - 343626 | 22714.4 |
| electron transport complex protein rnfe | PDPJ_1_00392 | Not Available | Positive | 343629 - 344315 | 24476.7 |
| endonuclease iii | PDPJ_1_00393 | Not Available | Positive | 344389 - 345039 | 24308.5 |
| hypothetical protein | PDPJ_1_00394 | Not Available | Negative | 345206 - 346117 | 35059.6 |
| hypothetical protein | PDPJ_1_00395 | Not Available | Positive | 346377 - 347069 | 26200.0 |
| hypothetical protein | PDPJ_1_00396 | Not Available | Positive | 347112 - 347387 | 10458.7 |
| hypothetical protein | PDPJ_1_00397 | Not Available | Positive | 347436 - 347657 | 8273.29 |
| ribonuclease t | PDPJ_1_00398 | Not Available | Positive | 347986 - 348651 | 24728.2 |
| 47 kda outer membrane protein precursor | PDPJ_1_00399 | Not Available | Positive | 348951 - 350195 | 45254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

