Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorelay protein luxu | PDPJ_1_00380 | Not Available | Negative | 331573 - 331974 | 14864.6 |
| luminescence regulatory protein luxo | PDPJ_1_00381 | Not Available | Negative | 331987 - 333426 | 52723.9 |
| uvrabc system protein b | PDPJ_1_00382 | Not Available | Negative | 333774 - 335801 | 76724.6 |
| hypothetical protein | PDPJ_1_00383 | Not Available | Negative | 335997 - 336428 | 15947.0 |
| hypothetical protein | PDPJ_1_00384 | Not Available | Positive | 336566 - 336841 | 10458.7 |
| hypothetical protein | PDPJ_1_00385 | Not Available | Positive | 336890 - 337252 | 13745.2 |
| peptidase e | PDPJ_1_00386 | Not Available | Negative | 337462 - 338199 | 27082.5 |
| electron transport complex protein rnfa | PDPJ_1_00387 | Not Available | Positive | 338580 - 339161 | 20862.6 |
| electron transport complex protein rnfb | PDPJ_1_00388 | Not Available | Positive | 339163 - 339741 | 20274.6 |
| electron transport complex protein rnfc | PDPJ_1_00389 | Not Available | Positive | 339744 - 341933 | 79408.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

