Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00031 | Not Available | Negative | 25446 - 25667 | 8291.33 |
| hypothetical protein | PDPJ_1_00032 | Not Available | Negative | 25716 - 25991 | 10458.7 |
| nucleoside permease nupc | PDPJ_1_00033 | Not Available | Positive | 26335 - 27534 | 43665.6 |
| 2,3-dehydroadipyl-coa hydratase | PDPJ_1_00034 | Not Available | Positive | 27731 - 28489 | 28579.4 |
| aspartate aminotransferase | PDPJ_1_00035 | Not Available | Positive | 28633 - 29823 | 43454.9 |
| hypothetical protein | PDPJ_1_00036 | Not Available | Negative | 29952 - 30161 | 8135.64 |
| hypothetical protein | PDPJ_1_00037 | Not Available | Negative | 30366 - 30767 | 14311.4 |
| hypothetical protein | PDPJ_1_00038 | Not Available | Positive | 31068 - 31727 | 25223.0 |
| rna polymerase sigma factor rpos | PDPJ_1_00039 | Not Available | Negative | 31724 - 32572 | 32509.1 |
| regulatory protein uhpc | PDPJ_1_00040 | Not Available | Negative | 32827 - 34158 | 49608.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

