Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic pyranopterin monophosphate synthase accessory protein | PDPJ_1_00370 | Not Available | Negative | 326247 - 326726 | 17172.9 |
| cyclic pyranopterin monophosphate synthase | PDPJ_1_00371 | Not Available | Negative | 326800 - 327786 | 37118.7 |
| hypothetical protein | PDPJ_1_00372 | Not Available | Positive | 328124 - 328399 | 10458.7 |
| hypothetical protein | PDPJ_1_00373 | Not Available | Positive | 328448 - 328669 | 8291.33 |
| hypothetical protein | PDPJ_1_00374 | Not Available | Positive | 328898 - 329125 | 8318.92 |
| atp-dependent protease la domain protein | PDPJ_1_00375 | Not Available | Positive | 329246 - 329821 | 22585.3 |
| putative gluconeogenesis factor | PDPJ_1_00376 | Not Available | Positive | 329984 - 330466 | 17478.3 |
| hypothetical protein | PDPJ_1_00377 | Not Available | Negative | 330529 - 330750 | 8291.33 |
| hypothetical protein | PDPJ_1_00378 | Not Available | Negative | 330799 - 331074 | 10492.7 |
| gluconeogenesis factor | PDPJ_1_00379 | Not Available | Positive | 331160 - 331669 | 18667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

