Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic nitric oxide reductase flavorubredoxin | PDPJ_1_00360 | Not Available | Positive | 317940 - 319154 | 44868.5 |
| nitric oxide reductase flrd-nad(+) reductase | PDPJ_1_00361 | Not Available | Positive | 319179 - 320330 | 41509.9 |
| hypothetical protein | PDPJ_1_00362 | Not Available | Negative | 320408 - 320770 | 13953.9 |
| 50s ribosomal protein l16 arginine hydroxylase | PDPJ_1_00363 | Not Available | Positive | 321136 - 322137 | 37961.5 |
| periplasmic oligopeptide-binding protein precursor | PDPJ_1_00364 | Not Available | Negative | 322097 - 322381 | 10755.6 |
| periplasmic oligopeptide-binding protein precursor | PDPJ_1_00365 | Not Available | Negative | 322409 - 323497 | 40369.6 |
| hypothetical protein | PDPJ_1_00366 | Not Available | Positive | 324377 - 324502 | 4636.69 |
| hypothetical protein | PDPJ_1_00367 | Not Available | Negative | 324586 - 325152 | 22261.6 |
| molybdopterin synthase catalytic subunit | PDPJ_1_00368 | Not Available | Negative | 325553 - 326002 | 16865.7 |
| molybdopterin synthase sulfur carrier subunit | PDPJ_1_00369 | Not Available | Negative | 326005 - 326250 | 8831.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

