Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna translocase ftsk | PDPJ_1_00340 | Not Available | Negative | 295823 - 299167 | 120476.0 |
| leucine-responsive regulatory protein | PDPJ_1_00341 | Not Available | Negative | 299621 - 300244 | 24214.0 |
| hypothetical protein | PDPJ_1_00342 | Not Available | Negative | 300633 - 300767 | 5155.46 |
| hypothetical protein | PDPJ_1_00343 | Not Available | Negative | 300902 - 301177 | 10458.7 |
| thioredoxin reductase | PDPJ_1_00344 | Not Available | Positive | 301579 - 302538 | 34568.1 |
| atp-binding/permease protein cydd | PDPJ_1_00345 | Not Available | Positive | 302687 - 304468 | 65431.8 |
| putative abc transporter atp-binding protein | PDPJ_1_00346 | Not Available | Positive | 304461 - 306182 | 63386.7 |
| leucyl/phenylalanyl-trna--protein transferase | PDPJ_1_00347 | Not Available | Positive | 306393 - 307106 | 26804.9 |
| arginyl-trna-protein transferase | PDPJ_1_00348 | Not Available | Positive | 307110 - 307802 | 27135.2 |
| translation initiation factor if-1 | PDPJ_1_00349 | Not Available | Positive | 308002 - 308220 | 8219.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

