Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine 5'-monophosphate dehydrogenase | PDPJ_1_00320 | Not Available | Positive | 275465 - 275917 | 16668.0 |
| inner membrane protein yhjd | PDPJ_1_00321 | Not Available | Negative | 276034 - 277077 | 37840.5 |
| putative assembly protein | PDPJ_1_00322 | Not Available | Negative | 277242 - 279362 | 76193.8 |
| deoxycytidine triphosphate deaminase | PDPJ_1_00323 | Not Available | Negative | 279585 - 280178 | 21771.9 |
| uridine kinase | PDPJ_1_00324 | Not Available | Negative | 280301 - 280945 | 24303.6 |
| flagellum site-determining protein ylxh | PDPJ_1_00325 | Not Available | Negative | 281091 - 282176 | 38927.9 |
| methionine--trna ligase | PDPJ_1_00326 | Not Available | Positive | 282423 - 284471 | 76997.6 |
| l-cystine uptake protein tcyp | PDPJ_1_00327 | Not Available | Positive | 284825 - 286168 | 46836.2 |
| hypothetical protein | PDPJ_1_00328 | Not Available | Negative | 286325 - 286546 | 8291.33 |
| hypothetical protein | PDPJ_1_00329 | Not Available | Negative | 286595 - 286870 | 10458.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

