Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminodeoxychorismate lyase | PDPJ_1_00300 | Not Available | Negative | 254606 - 255619 | 37927.1 |
| aminodeoxychorismate lyase | PDPJ_1_00301 | Not Available | Negative | 255613 - 256422 | 30437.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | PDPJ_1_00302 | Not Available | Negative | 256556 - 257794 | 42619.0 |
| acyl carrier protein | PDPJ_1_00303 | Not Available | Negative | 257879 - 258115 | 8635.87 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PDPJ_1_00304 | Not Available | Negative | 258274 - 259008 | 25628.0 |
| malonyl coa-acyl carrier protein transacylase | PDPJ_1_00305 | Not Available | Negative | 259034 - 259963 | 32527.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 | PDPJ_1_00306 | Not Available | Negative | 260095 - 260919 | 29029.6 |
| phosphate acyltransferase | PDPJ_1_00307 | Not Available | Negative | 260996 - 262018 | 36673.1 |
| 50s ribosomal protein l32 | PDPJ_1_00308 | Not Available | Negative | 262031 - 262201 | 6207.5 |
| hypothetical protein | PDPJ_1_00309 | Not Available | Negative | 262224 - 262742 | 19295.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

