Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00290 | Not Available | Positive | 245006 - 245905 | 32408.7 |
| hypothetical protein | PDPJ_1_00291 | Not Available | Negative | 245977 - 246429 | 15234.8 |
| lysm domain/bon superfamily protein | PDPJ_1_00292 | Not Available | Negative | 246576 - 246905 | 11692.5 |
| pts system glucose-specific eiicb component | PDPJ_1_00293 | Not Available | Negative | 247248 - 248678 | 50395.9 |
| rdd family protein | PDPJ_1_00294 | Not Available | Negative | 249253 - 249699 | 16758.0 |
| pts system glucose-specific eiicba component | PDPJ_1_00295 | Not Available | Negative | 249699 - 251324 | 57825.2 |
| hypothetical protein | PDPJ_1_00296 | Not Available | Negative | 251852 - 252070 | 8440.17 |
| putative deoxyribonuclease ycfh | PDPJ_1_00297 | Not Available | Negative | 252136 - 252915 | 29360.2 |
| dna polymerase iii subunit delta' | PDPJ_1_00298 | Not Available | Negative | 253017 - 253979 | 35799.2 |
| thymidylate kinase | PDPJ_1_00299 | Not Available | Negative | 253980 - 254609 | 23121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

