Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00280 | Not Available | Negative | 236089 - 237402 | 47890.1 |
| nitrogen regulation protein nr(ii) | PDPJ_1_00281 | Not Available | Positive | 237580 - 239529 | 73568.1 |
| hydrogenase transcriptional regulatory protein hupr1 | PDPJ_1_00282 | Not Available | Positive | 239526 - 240026 | 18635.2 |
| d-lactate dehydrogenase | PDPJ_1_00283 | Not Available | Positive | 240187 - 241182 | 37217.6 |
| glycine cleavage system transcriptional activator | PDPJ_1_00284 | Not Available | Negative | 241205 - 242137 | 35120.1 |
| dna transformation protein tfox | PDPJ_1_00285 | Not Available | Negative | 242241 - 242831 | 22381.2 |
| hdod domain protein | PDPJ_1_00286 | Not Available | Positive | 243381 - 243671 | 10782.3 |
| hypothetical protein | PDPJ_1_00287 | Not Available | Positive | 243697 - 243972 | 10485.7 |
| hypothetical protein | PDPJ_1_00288 | Not Available | Positive | 244021 - 244242 | 8291.33 |
| hypothetical protein | PDPJ_1_00289 | Not Available | Positive | 244403 - 244696 | 11251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

