Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00021 | Not Available | Positive | 15496 - 15717 | 8291.33 |
| l-lactate permease | PDPJ_1_00022 | Not Available | Positive | 15897 - 16763 | 30627.7 |
| lactate utilization protein a | PDPJ_1_00023 | Not Available | Positive | 16945 - 17664 | 26271.1 |
| lactate utilization protein b | PDPJ_1_00024 | Not Available | Positive | 17676 - 19091 | 52546.1 |
| lactate utilization protein c | PDPJ_1_00025 | Not Available | Positive | 19106 - 19855 | 27336.3 |
| hth-type transcriptional regulator dmlr | PDPJ_1_00026 | Not Available | Positive | 20081 - 20983 | 33397.1 |
| n-acetylglucosamine repressor | PDPJ_1_00027 | Not Available | Negative | 21065 - 22279 | 44319.9 |
| 7-carboxy-7-deazaguanine synthase | PDPJ_1_00028 | Not Available | Positive | 22509 - 23177 | 24624.6 |
| asparagine--trna ligase | PDPJ_1_00029 | Not Available | Positive | 23401 - 24801 | 52647.3 |
| hydroxyethylthiazole kinase | PDPJ_1_00030 | Not Available | Positive | 24867 - 25289 | 15111.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

