Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00270 | Not Available | Positive | 225952 - 227118 | 44471.0 |
| uridine phosphorylase | PDPJ_1_00271 | Not Available | Negative | 227251 - 228018 | 27336.8 |
| lead, cadmium, zinc and mercury-transporting atpase | PDPJ_1_00272 | Not Available | Negative | 228484 - 230958 | 87422.4 |
| hydrogenase transcriptional regulatory protein hupr1 | PDPJ_1_00273 | Not Available | Negative | 231128 - 231601 | 17962.4 |
| c4-dicarboxylate transport sensor protein dctb | PDPJ_1_00274 | Not Available | Negative | 231611 - 232939 | 48903.7 |
| sodium:sulfate symporter transmembrane region | PDPJ_1_00275 | Not Available | Negative | 232958 - 233335 | 13182.6 |
| sodium-dependent dicarboxylate transporter sdcs | PDPJ_1_00276 | Not Available | Negative | 233422 - 234372 | 34897.8 |
| hypothetical protein | PDPJ_1_00277 | Not Available | Negative | 234728 - 234949 | 8291.33 |
| hypothetical protein | PDPJ_1_00278 | Not Available | Negative | 234998 - 235273 | 10458.7 |
| inosine 5'-monophosphate dehydrogenase | PDPJ_1_00279 | Not Available | Negative | 235494 - 235934 | 16357.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

