Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00260 | Not Available | Negative | 217895 - 218149 | 9245.19 |
| hypothetical protein | PDPJ_1_00261 | Not Available | Negative | 218222 - 218434 | 8131.76 |
| hypothetical protein | PDPJ_1_00262 | Not Available | Positive | 218546 - 218821 | 10458.7 |
| hypothetical protein | PDPJ_1_00263 | Not Available | Positive | 218870 - 219091 | 8291.33 |
| peptidase family u32 | PDPJ_1_00264 | Not Available | Negative | 219154 - 220551 | 53001.6 |
| hypothetical protein | PDPJ_1_00265 | Not Available | Negative | 220712 - 220933 | 8291.33 |
| hypothetical protein | PDPJ_1_00266 | Not Available | Negative | 220982 - 221257 | 10458.7 |
| hypothetical protein | PDPJ_1_00267 | Not Available | Positive | 221381 - 221515 | 5155.46 |
| hypothetical protein | PDPJ_1_00268 | Not Available | Negative | 221672 - 224590 | 104118.0 |
| leucine efflux protein | PDPJ_1_00269 | Not Available | Positive | 224827 - 225480 | 23420.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

