Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g 1 | PDPJ_1_00250 | Not Available | Positive | 198517 - 200604 | 76324.7 |
| dipeptidase | PDPJ_1_00251 | Not Available | Negative | 200687 - 202162 | 55000.2 |
| sensor protein tors | PDPJ_1_00252 | Not Available | Negative | 202348 - 205266 | 107632.0 |
| periplasmic protein tort precursor | PDPJ_1_00253 | Not Available | Positive | 205421 - 206494 | 40123.4 |
| methylglyoxal synthase | PDPJ_1_00254 | Not Available | Positive | 206611 - 207069 | 17066.5 |
| alcohol dehydrogenase | PDPJ_1_00255 | Not Available | Positive | 207602 - 208297 | 25141.8 |
| helicase iv | PDPJ_1_00256 | Not Available | Negative | 208332 - 210440 | 80842.2 |
| inner membrane protein yccs | PDPJ_1_00257 | Not Available | Positive | 210763 - 212928 | 81926.8 |
| cytochrome c-type protein torc | PDPJ_1_00258 | Not Available | Negative | 213049 - 214218 | 43426.1 |
| dimethyl sulfoxide/trimethylamine n-oxide reductase precursor | PDPJ_1_00259 | Not Available | Positive | 214917 - 217559 | 97365.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

