Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00230 | Not Available | Positive | 185989 - 186123 | 5155.46 |
| molybdopterin-guanine dinucleotide biosynthesis adapter protein | PDPJ_1_00231 | Not Available | Positive | 186607 - 187119 | 19488.3 |
| hypothetical protein | PDPJ_1_00232 | Not Available | Positive | 187130 - 187351 | 8199.2 |
| putative 8-oxo-dgtp diphosphatase ytkd | PDPJ_1_00233 | Not Available | Positive | 187306 - 187593 | 11092.0 |
| hypothetical protein | PDPJ_1_00234 | Not Available | Negative | 187755 - 188774 | 37473.6 |
| hypothetical protein | PDPJ_1_00235 | Not Available | Negative | 189067 - 189201 | 5155.46 |
| hypothetical protein | PDPJ_1_00236 | Not Available | Negative | 189336 - 189611 | 10458.7 |
| thiosulfate sulfurtransferase ynje precursor | PDPJ_1_00237 | Not Available | Positive | 189844 - 191148 | 48715.6 |
| oxidoreductase ydhf | PDPJ_1_00238 | Not Available | Negative | 191244 - 192152 | 34036.7 |
| hypothetical protein | PDPJ_1_00239 | Not Available | Positive | 192313 - 192513 | 7565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

