Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 179347 - 179420 | Not Available |
| hypothetical protein | PDPJ_1_00221 | Not Available | Positive | 179659 - 180471 | 30399.3 |
| hypothetical protein | PDPJ_1_00222 | Not Available | Positive | 180725 - 181000 | 10458.7 |
| hypothetical protein | PDPJ_1_00223 | Not Available | Positive | 181049 - 181270 | 8291.33 |
| hybrid peroxiredoxin hyprx5 | PDPJ_1_00224 | Not Available | Negative | 181830 - 182138 | 11469.6 |
| hypothetical protein | PDPJ_1_00225 | Not Available | Positive | 182422 - 183030 | 23064.9 |
| hypothetical protein | PDPJ_1_00226 | Not Available | Positive | 183159 - 183536 | 13481.2 |
| endonuclease/exonuclease/phosphatase family protein | PDPJ_1_00227 | Not Available | Negative | 183759 - 184859 | 41217.9 |
| hypothetical protein | PDPJ_1_00228 | Not Available | Negative | 184892 - 185377 | 18506.9 |
| hypothetical protein | PDPJ_1_00229 | Not Available | Positive | 185579 - 185854 | 10458.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

