Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00213 | Not Available | Negative | 173799 - 174275 | 18876.8 |
| hypothetical protein | PDPJ_1_00214 | Not Available | Negative | 174365 - 174577 | 8073.77 |
| hypothetical protein | PDPJ_1_00215 | Not Available | Negative | 174961 - 175182 | 8291.33 |
| hypothetical protein | PDPJ_1_00216 | Not Available | Negative | 175231 - 175326 | 3489.24 |
| long-chain-fatty-acid--coa ligase | PDPJ_1_00217 | Not Available | Positive | 175830 - 177377 | 57315.9 |
| hypothetical protein | PDPJ_1_00218 | Not Available | Positive | 177553 - 178305 | 28878.8 |
| hypothetical protein | PDPJ_1_00219 | Not Available | Negative | 178329 - 178580 | 9145.42 |
| hypothetical protein | PDPJ_1_00220 | Not Available | Positive | 178799 - 178981 | 6628.03 |
| Trna-leu | Not Available | Not Available | Positive | 179116 - 179202 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 179267 - 179342 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

