Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00011 | Not Available | Positive | 7555 - 7722 | 6229.43 |
| atp-dependent dethiobiotin synthetase biod 1 | PDPJ_1_00012 | Not Available | Negative | 7837 - 8520 | 24981.1 |
| malonyl-[acyl-carrier protein] o-methyltransferase | PDPJ_1_00013 | Not Available | Negative | 8513 - 9379 | 31848.0 |
| 8-amino-7-oxononanoate synthase | PDPJ_1_00014 | Not Available | Negative | 9372 - 10565 | 43881.5 |
| biotin synthase | PDPJ_1_00015 | Not Available | Negative | 10549 - 11601 | 39448.5 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PDPJ_1_00016 | Not Available | Positive | 11785 - 13062 | 47202.9 |
| atp-dependent protease la (lon) domain protein | PDPJ_1_00017 | Not Available | Positive | 13134 - 13700 | 21700.8 |
| hypothetical protein | PDPJ_1_00018 | Not Available | Negative | 14127 - 14270 | 5571.14 |
| glycolate permease glca | PDPJ_1_00019 | Not Available | Positive | 14386 - 15129 | 26401.0 |
| hypothetical protein | PDPJ_1_00020 | Not Available | Positive | 15172 - 15447 | 10458.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

