Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00157 | Not Available | Positive | 130513 - 130734 | 8291.33 |
| hypothetical protein | PDPJ_1_00158 | Not Available | Positive | 130968 - 131396 | 15945.8 |
| hypothetical protein | PDPJ_1_00159 | Not Available | Negative | 131485 - 131760 | 9956.1 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | PDPJ_1_00160 | Not Available | Positive | 132023 - 133684 | 61240.1 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | PDPJ_1_00161 | Not Available | Positive | 133681 - 135003 | 48820.7 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | PDPJ_1_00162 | Not Available | Positive | 135000 - 136211 | 45178.7 |
| inner membrane transport protein ynfm | PDPJ_1_00163 | Not Available | Negative | 136296 - 137504 | 43875.7 |
| hth-type transcriptional regulator cynr | PDPJ_1_00164 | Not Available | Positive | 137612 - 138487 | 33240.6 |
| putative cryptic c4-dicarboxylate transporter dcud | PDPJ_1_00165 | Not Available | Positive | 138810 - 140177 | 47315.7 |
| hypothetical protein | PDPJ_1_00166 | Not Available | Positive | 140356 - 141195 | 30364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

