Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein n | PDPJ_1_01531 | Not Available | Positive | 1516375 - 1517136 | 27425.8 |
| adp compounds hydrolase nude | PDPJ_1_01532 | Not Available | Positive | 1517182 - 1517745 | 20823.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | PDPJ_1_01533 | Not Available | Positive | 1517742 - 1518566 | 30304.3 |
| soluble pyridine nucleotide transhydrogenase | PDPJ_1_01534 | Not Available | Negative | 1518664 - 1520079 | 51864.6 |
| hth-type transcriptional repressor fabr | PDPJ_1_01535 | Not Available | Positive | 1520388 - 1521020 | 23930.7 |
| inner membrane protein yijd | PDPJ_1_01536 | Not Available | Positive | 1521035 - 1521424 | 14403.0 |
| trna/tmrna (uracil-c(5))-methyltransferase | PDPJ_1_01537 | Not Available | Negative | 1521493 - 1522599 | 43045.1 |
| vitamin b12 transporter btub precursor | PDPJ_1_01538 | Not Available | Positive | 1522986 - 1524815 | 67730.4 |
| atp-binding region | PDPJ_1_01539 | Not Available | Positive | 1524863 - 1525537 | 25455.6 |
| glutamate racemase | PDPJ_1_01540 | Not Available | Positive | 1525595 - 1526416 | 29794.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

