Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative n-acetyltransferase yjcf | PDPJ_1_01511 | Not Available | Positive | 1497509 - 1498426 | 34958.2 |
| putative transposase | PDPJ_1_01512 | Not Available | Negative | 1498626 - 1499720 | 42845.4 |
| hypothetical protein | PDPJ_1_01513 | Not Available | Negative | 1499843 - 1500142 | 11436.6 |
| asma family protein | PDPJ_1_01514 | Not Available | Negative | 1500250 - 1501305 | 40211.0 |
| hypothetical protein | PDPJ_1_01515 | Not Available | Negative | 1501441 - 1501662 | 8291.33 |
| hypothetical protein | PDPJ_1_01516 | Not Available | Negative | 1501711 - 1501986 | 10410.6 |
| phosphoenolpyruvate carboxykinase | PDPJ_1_01517 | Not Available | Negative | 1502234 - 1503865 | 60048.9 |
| 33 kda chaperonin | PDPJ_1_01518 | Not Available | Negative | 1504189 - 1505067 | 32354.0 |
| heat shock protein 15 | PDPJ_1_01519 | Not Available | Negative | 1505205 - 1505612 | 15559.6 |
| type ii secretion system protein c | PDPJ_1_01520 | Not Available | Positive | 1505904 - 1506800 | 32779.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

