Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxyfutalosine deaminase | PDPJ_1_01501 | Not Available | Negative | 1486248 - 1487252 | 36350.6 |
| nitrogen assimilation regulatory protein | PDPJ_1_01502 | Not Available | Negative | 1487445 - 1488857 | 52730.0 |
| nitrogen regulation protein nr(ii) | PDPJ_1_01503 | Not Available | Negative | 1488875 - 1489936 | 39256.9 |
| hypothetical protein | PDPJ_1_01504 | Not Available | Negative | 1490037 - 1490603 | 20868.9 |
| glutamine synthetase | PDPJ_1_01505 | Not Available | Negative | 1490728 - 1492137 | 51660.2 |
| hypothetical protein | PDPJ_1_01506 | Not Available | Positive | 1492711 - 1494549 | 67673.7 |
| hypothetical protein | PDPJ_1_01507 | Not Available | Positive | 1494735 - 1495274 | 20275.5 |
| hypothetical protein | PDPJ_1_01508 | Not Available | Negative | 1495276 - 1495923 | 24273.6 |
| hypothetical protein | PDPJ_1_01509 | Not Available | Positive | 1496166 - 1497035 | 31947.6 |
| d-tyrosyl-trna(tyr) deacylase | PDPJ_1_01510 | Not Available | Positive | 1497032 - 1497469 | 15692.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

