Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron-encoded protein ltra | PDPJ_1_01481 | Not Available | Positive | 1467241 - 1468551 | 50390.0 |
| hypothetical protein | PDPJ_1_01482 | Not Available | Negative | 1469143 - 1469364 | 8272.28 |
| hypothetical protein | PDPJ_1_01483 | Not Available | Negative | 1469413 - 1469688 | 10472.7 |
| dna polymerase i | PDPJ_1_01484 | Not Available | Positive | 1470468 - 1473239 | 102290.0 |
| putative transposase | PDPJ_1_01485 | Not Available | Negative | 1473592 - 1474227 | 25132.5 |
| hypothetical protein | PDPJ_1_01486 | Not Available | Negative | 1474388 - 1474609 | 8291.33 |
| hypothetical protein | PDPJ_1_01487 | Not Available | Negative | 1474658 - 1474933 | 10458.7 |
| dna polymerase iii polc-type | PDPJ_1_01488 | Not Available | Positive | 1475012 - 1475632 | 22973.9 |
| oxygen-independent coproporphyrinogen-iii oxidase | PDPJ_1_01489 | Not Available | Negative | 1475625 - 1476998 | 53258.9 |
| hypothetical protein | PDPJ_1_01490 | Not Available | Negative | 1477104 - 1477583 | 18416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

