Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| frataxin-like protein | PDPJ_1_01471 | Not Available | Negative | 1453882 - 1454193 | 11923.7 |
| diaminopimelate decarboxylase | PDPJ_1_01472 | Not Available | Positive | 1454429 - 1455682 | 46074.9 |
| diaminopimelate epimerase | PDPJ_1_01473 | Not Available | Positive | 1455691 - 1456521 | 30289.3 |
| hypothetical protein | PDPJ_1_01474 | Not Available | Positive | 1456518 - 1457240 | 27252.7 |
| tyrosine recombinase xerc | PDPJ_1_01475 | Not Available | Positive | 1457237 - 1458157 | 34720.0 |
| flavin mononucleotide phosphatase yigb | PDPJ_1_01476 | Not Available | Positive | 1458185 - 1458937 | 28299.8 |
| dna helicase ii | PDPJ_1_01477 | Not Available | Positive | 1459146 - 1461317 | 82454.0 |
| gamma-glutamyltranspeptidase precursor | PDPJ_1_01478 | Not Available | Negative | 1461365 - 1463140 | 64080.1 |
| atp-dependent dna helicase recq | PDPJ_1_01479 | Not Available | Positive | 1463359 - 1465200 | 69402.8 |
| inner membrane protein yhhq | PDPJ_1_01480 | Not Available | Positive | 1465937 - 1466656 | 26810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

