Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01461 | Not Available | Positive | 1441599 - 1442276 | 24338.2 |
| regulatory protein asnc | PDPJ_1_01462 | Not Available | Negative | 1442335 - 1442796 | 17230.9 |
| putative diguanylate cyclase yege | PDPJ_1_01463 | Not Available | Positive | 1442958 - 1444946 | 75837.5 |
| ribosomal rna small subunit methyltransferase j | PDPJ_1_01464 | Not Available | Positive | 1444994 - 1445767 | 27929.8 |
| hypothetical protein | PDPJ_1_01465 | Not Available | Positive | 1445858 - 1446322 | 16621.6 |
| putative protoheme ix biogenesis protein | PDPJ_1_01466 | Not Available | Negative | 1446667 - 1447854 | 43698.9 |
| putative uroporphyrinogen-iii c-methyltransferase | PDPJ_1_01467 | Not Available | Negative | 1447851 - 1449131 | 46740.5 |
| uroporphyrinogen-iii synthase | PDPJ_1_01468 | Not Available | Negative | 1449136 - 1449891 | 27896.6 |
| porphobilinogen deaminase | PDPJ_1_01469 | Not Available | Negative | 1449891 - 1450823 | 33840.9 |
| adenylate cyclase | PDPJ_1_01470 | Not Available | Positive | 1451181 - 1453808 | 100776.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

