Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposon tn7 transposition protein tnsa | PDPJ_1_01441 | Not Available | Positive | 1432083 - 1432403 | 12320.0 |
| integrase core domain protein | PDPJ_1_01442 | Not Available | Negative | 1432418 - 1432723 | 11709.8 |
| integrase core domain protein | PDPJ_1_01443 | Not Available | Negative | 1432663 - 1433208 | 21078.8 |
| transposase | PDPJ_1_01444 | Not Available | Negative | 1433343 - 1433639 | 11177.5 |
| hypothetical protein | PDPJ_1_01445 | Not Available | Positive | 1433752 - 1434027 | 10458.7 |
| hypothetical protein | PDPJ_1_01446 | Not Available | Positive | 1434076 - 1434297 | 8291.33 |
| hypothetical protein | PDPJ_1_01447 | Not Available | Positive | 1434433 - 1435191 | 28594.4 |
| hypothetical protein | PDPJ_1_01448 | Not Available | Positive | 1435214 - 1436005 | 29841.3 |
| hypothetical protein | PDPJ_1_01449 | Not Available | Positive | 1436009 - 1436494 | 18518.9 |
| hypothetical protein | PDPJ_1_01450 | Not Available | Positive | 1438112 - 1438201 | 3456.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

