Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-1 | PDPJ_1_01431 | Not Available | Positive | 1423020 - 1423346 | 11597.0 |
| hypothetical protein | PDPJ_1_01432 | Not Available | Positive | 1423557 - 1424816 | 46873.8 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | PDPJ_1_01433 | Not Available | Positive | 1424999 - 1426855 | 69494.8 |
| ferredoxin | PDPJ_1_01434 | Not Available | Positive | 1426914 - 1427180 | 9832.04 |
| nad(p)h-flavin reductase | PDPJ_1_01435 | Not Available | Positive | 1427188 - 1427892 | 25809.7 |
| eama-like transporter family protein | PDPJ_1_01436 | Not Available | Negative | 1427988 - 1428881 | 32874.0 |
| hypothetical protein | PDPJ_1_01437 | Not Available | Negative | 1428993 - 1429415 | 15477.6 |
| putative ferritin-1 | PDPJ_1_01438 | Not Available | Positive | 1429670 - 1430197 | 19860.5 |
| universal stress protein b | PDPJ_1_01439 | Not Available | Positive | 1430281 - 1430619 | 12915.2 |
| tricarballylate dehydrogenase | PDPJ_1_01440 | Not Available | Positive | 1430714 - 1431952 | 45278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

