Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01421 | Not Available | Positive | 1411779 - 1412000 | 8238.27 |
| hypothetical protein | PDPJ_1_01422 | Not Available | Negative | 1412063 - 1412815 | 29627.7 |
| site-specific tyrosine recombinase xerc | PDPJ_1_01423 | Not Available | Negative | 1412808 - 1414127 | 50654.3 |
| glutathione reductase | PDPJ_1_01424 | Not Available | Negative | 1414234 - 1415592 | 48513.2 |
| ribosomal rna large subunit methyltransferase j | PDPJ_1_01425 | Not Available | Negative | 1415765 - 1416688 | 35292.6 |
| oligopeptidase a | PDPJ_1_01426 | Not Available | Positive | 1416802 - 1418844 | 76696.9 |
| putative acyltransferase | PDPJ_1_01427 | Not Available | Negative | 1418919 - 1419389 | 18009.4 |
| cyclic nucleotide-binding domain protein | PDPJ_1_01428 | Not Available | Negative | 1419472 - 1420041 | 22246.1 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PDPJ_1_01429 | Not Available | Negative | 1420088 - 1421593 | 55812.2 |
| atp-dependent rna helicase rhlb | PDPJ_1_01430 | Not Available | Negative | 1421603 - 1422907 | 48811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

