Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | PDPJ_1_01370 | Not Available | Negative | 1357679 - 1358761 | 42504.0 |
| hypothetical protein | PDPJ_1_01371 | Not Available | Negative | 1358884 - 1359252 | 14123.8 |
| integrase core domain protein | PDPJ_1_01372 | Not Available | Negative | 1359328 - 1359894 | 21774.3 |
| transposase | PDPJ_1_01373 | Not Available | Negative | 1360029 - 1360325 | 11162.5 |
| hypothetical protein | PDPJ_1_01374 | Not Available | Positive | 1360734 - 1361201 | 17982.9 |
| transposase | PDPJ_1_01375 | Not Available | Positive | 1361234 - 1361530 | 11177.5 |
| integrase core domain protein | PDPJ_1_01376 | Not Available | Positive | 1361665 - 1362378 | 27660.3 |
| hypothetical protein | PDPJ_1_01377 | Not Available | Negative | 1362404 - 1363099 | 26253.8 |
| hypothetical protein | PDPJ_1_01378 | Not Available | Positive | 1363169 - 1363444 | 10474.7 |
| hypothetical protein | PDPJ_1_01379 | Not Available | Positive | 1363493 - 1363714 | 8291.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

