Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | PDPJ_1_01360 | Not Available | Negative | 1347481 - 1348575 | 42887.5 |
| hypothetical protein | PDPJ_1_01361 | Not Available | Negative | 1348698 - 1348997 | 11436.6 |
| hypothetical protein | PDPJ_1_01362 | Not Available | Positive | 1349166 - 1349396 | 9048.96 |
| transcriptional repressor dica | PDPJ_1_01363 | Not Available | Positive | 1349647 - 1350012 | 14022.9 |
| l-threonine dehydratase biosynthetic ilva | PDPJ_1_01364 | Not Available | Negative | 1350088 - 1351647 | 57008.3 |
| dihydroxy-acid dehydratase | PDPJ_1_01365 | Not Available | Negative | 1351649 - 1353490 | 65846.4 |
| branched-chain-amino-acid aminotransferase | PDPJ_1_01366 | Not Available | Negative | 1353599 - 1354528 | 33911.4 |
| acetolactate synthase isozyme 2 small subunit | PDPJ_1_01367 | Not Available | Negative | 1354568 - 1354825 | 9742.04 |
| acetolactate synthase isozyme 2 large subunit | PDPJ_1_01368 | Not Available | Negative | 1354828 - 1356474 | 59246.4 |
| putative transposase | PDPJ_1_01369 | Not Available | Negative | 1357121 - 1357540 | 16372.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

