Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit b | PDPJ_1_01350 | Not Available | Positive | 1335673 - 1336143 | 17324.0 |
| atp synthase subunit delta | PDPJ_1_01351 | Not Available | Positive | 1336159 - 1336692 | 19449.4 |
| atp synthase subunit alpha | PDPJ_1_01352 | Not Available | Positive | 1336709 - 1338250 | 55675.7 |
| atp synthase gamma chain | PDPJ_1_01353 | Not Available | Positive | 1338295 - 1339161 | 31871.3 |
| atp synthase subunit beta | PDPJ_1_01354 | Not Available | Positive | 1339194 - 1340600 | 50779.9 |
| atp synthase epsilon chain | PDPJ_1_01355 | Not Available | Positive | 1340618 - 1341040 | 15144.3 |
| bifunctional protein glmu | PDPJ_1_01356 | Not Available | Positive | 1341231 - 1342589 | 48495.1 |
| glucitol operon repressor | PDPJ_1_01357 | Not Available | Positive | 1342796 - 1343563 | 28056.4 |
| glutamine--fructose-6-phosphate aminotransferase[isomerizing] | PDPJ_1_01358 | Not Available | Positive | 1343581 - 1345413 | 66843.2 |
| group ii intron-encoded protein ltra | PDPJ_1_01359 | Not Available | Positive | 1346028 - 1347326 | 49922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

