Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01330 | Not Available | Negative | 1319709 - 1319930 | 8291.33 |
| hypothetical protein | PDPJ_1_01331 | Not Available | Negative | 1319979 - 1320239 | 9959.07 |
| hypothetical protein | PDPJ_1_01332 | Not Available | Positive | 1320482 - 1320805 | 12592.8 |
| 50s ribosomal protein l34 | PDPJ_1_01333 | Not Available | Positive | 1321121 - 1321258 | 5253.62 |
| ribonuclease p protein component | PDPJ_1_01334 | Not Available | Positive | 1321271 - 1321627 | 13681.7 |
| membrane protein insertase yidc | PDPJ_1_01335 | Not Available | Positive | 1321854 - 1323476 | 60737.5 |
| hypothetical protein | PDPJ_1_01336 | Not Available | Positive | 1323682 - 1323984 | 11564.8 |
| putative transposase | PDPJ_1_01337 | Not Available | Positive | 1324107 - 1325201 | 42845.4 |
| hypothetical protein | PDPJ_1_01338 | Not Available | Positive | 1325513 - 1325809 | 11313.4 |
| putative transposase | PDPJ_1_01339 | Not Available | Positive | 1325932 - 1326702 | 30210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

