Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid oxidation complex subunit alpha | PDPJ_1_01310 | Not Available | Positive | 1296446 - 1298626 | 79519.8 |
| 3-ketoacyl-coa thiolase | PDPJ_1_01311 | Not Available | Positive | 1298634 - 1299800 | 41369.3 |
| putative acrylyl-coa reductase acui | PDPJ_1_01312 | Not Available | Positive | 1300002 - 1300982 | 34925.4 |
| nodulation protein d 2 | PDPJ_1_01313 | Not Available | Negative | 1301066 - 1302010 | 35664.6 |
| hypothetical protein | PDPJ_1_01314 | Not Available | Negative | 1302090 - 1302272 | 6860.3 |
| sulfurtransferase tusa | PDPJ_1_01315 | Not Available | Positive | 1302415 - 1302672 | 9558.55 |
| group ii intron-encoded protein ltra | PDPJ_1_01316 | Not Available | Negative | 1302699 - 1304009 | 50325.0 |
| hypothetical protein | PDPJ_1_01317 | Not Available | Negative | 1304661 - 1304843 | 6846.69 |
| hypothetical protein | PDPJ_1_01318 | Not Available | Negative | 1304959 - 1305516 | 19789.1 |
| putative lipoprotein yiad precursor | PDPJ_1_01319 | Not Available | Negative | 1305817 - 1306506 | 23584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

