Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fluoride ion transporter crcb | PDPJ_1_01296 | Not Available | Positive | 1263187 - 1263570 | 13604.2 |
| Trna-pro | Not Available | Not Available | Positive | 1263852 - 1263928 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1263983 - 1264058 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1264068 - 1264144 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1264201 - 1264276 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1264308 - 1264384 | Not Available |
| cytochrome c5 | PDPJ_1_01297 | Not Available | Positive | 1264663 - 1265073 | 14520.4 |
| atp-dependent dna helicase rep | PDPJ_1_01298 | Not Available | Negative | 1265151 - 1267169 | 77571.4 |
| putative hth-type transcriptional regulator | PDPJ_1_01299 | Not Available | Positive | 1267359 - 1267925 | 21505.1 |
| multidrug resistance protein mdta precursor | PDPJ_1_01300 | Not Available | Positive | 1267949 - 1269055 | 40704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

