Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-aminolevulinic acid dehydratase | PDPJ_1_01276 | Not Available | Negative | 1243570 - 1244607 | 38187.9 |
| tat-linked quality control protein tatd | PDPJ_1_01277 | Not Available | Negative | 1244736 - 1245524 | 29635.6 |
| sec-independent protein translocase protein tatc | PDPJ_1_01278 | Not Available | Negative | 1245596 - 1246351 | 28176.0 |
| sec-independent protein translocase protein tatb | PDPJ_1_01279 | Not Available | Negative | 1246363 - 1246710 | 12986.6 |
| sec-independent protein translocase protein tata | PDPJ_1_01280 | Not Available | Negative | 1246714 - 1246974 | 9464.37 |
| putative protein kinase ubib | PDPJ_1_01281 | Not Available | Negative | 1247049 - 1248683 | 63014.4 |
| scp-2 sterol transfer family protein | PDPJ_1_01282 | Not Available | Negative | 1248693 - 1249295 | 22221.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | PDPJ_1_01283 | Not Available | Negative | 1249304 - 1250059 | 28123.8 |
| dna recombination protein rmuc | PDPJ_1_01284 | Not Available | Negative | 1250182 - 1251708 | 57936.9 |
| aromatic amino acid exporter | PDPJ_1_01285 | Not Available | Positive | 1251922 - 1252809 | 32543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

