Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01256 | Not Available | Positive | 1223553 - 1223885 | 12659.4 |
| inner membrane protein yiah | PDPJ_1_01257 | Not Available | Negative | 1223895 - 1224908 | 38642.9 |
| group ii intron-encoded protein ltra | PDPJ_1_01258 | Not Available | Negative | 1224964 - 1226274 | 50380.1 |
| putative oxidoreductase | PDPJ_1_01259 | Not Available | Negative | 1226897 - 1227619 | 25996.4 |
| p-aminobenzoyl-glutamate transport protein | PDPJ_1_01260 | Not Available | Positive | 1228233 - 1228739 | 17421.8 |
| p-aminobenzoyl-glutamate transport protein | PDPJ_1_01261 | Not Available | Positive | 1228736 - 1229692 | 34528.0 |
| dna-binding transcriptional regulator hcar | PDPJ_1_01262 | Not Available | Positive | 1230100 - 1230654 | 20367.9 |
| patatin-like phospholipase | PDPJ_1_01263 | Not Available | Positive | 1230798 - 1231643 | 31474.5 |
| dna protection during starvation protein | PDPJ_1_01264 | Not Available | Positive | 1231781 - 1232257 | 18312.9 |
| homoserine/homoserine lactone efflux protein | PDPJ_1_01265 | Not Available | Negative | 1232510 - 1233142 | 22444.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

