Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid protease glpg | PDPJ_1_01246 | Not Available | Negative | 1214829 - 1215674 | 31896.1 |
| thiosulfate sulfurtransferase glpe | PDPJ_1_01247 | Not Available | Negative | 1215706 - 1216035 | 12345.4 |
| rna polymerase sigma factor rpoh | PDPJ_1_01248 | Not Available | Negative | 1216626 - 1217489 | 32771.9 |
| cell division protein ftsx | PDPJ_1_01249 | Not Available | Negative | 1217635 - 1218561 | 34147.1 |
| cell division atp-binding protein ftse | PDPJ_1_01250 | Not Available | Negative | 1218548 - 1219219 | 25027.6 |
| signal recognition particle receptor ftsy | PDPJ_1_01251 | Not Available | Negative | 1219223 - 1220611 | 50344.2 |
| ribosomal rna small subunit methyltransferase d | PDPJ_1_01252 | Not Available | Positive | 1220696 - 1221301 | 22701.1 |
| hypothetical protein | PDPJ_1_01253 | Not Available | Positive | 1221298 - 1221564 | 9973.06 |
| hypothetical protein | PDPJ_1_01254 | Not Available | Negative | 1221637 - 1221879 | 9128.95 |
| hypothetical protein | PDPJ_1_01255 | Not Available | Negative | 1222853 - 1223218 | 14238.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

