Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-damage-inducible protein f | PDPJ_1_01226 | Not Available | Negative | 1194461 - 1195798 | 48963.1 |
| protoheme ix farnesyltransferase | PDPJ_1_01227 | Not Available | Negative | 1195919 - 1196824 | 33289.7 |
| heme a synthase | PDPJ_1_01228 | Not Available | Negative | 1197219 - 1197866 | 23956.9 |
| hypothetical protein | PDPJ_1_01229 | Not Available | Negative | 1197876 - 1198466 | 22023.3 |
| surf1 family protein | PDPJ_1_01230 | Not Available | Negative | 1198581 - 1199171 | 23256.4 |
| hypothetical protein | PDPJ_1_01231 | Not Available | Positive | 1199238 - 1199444 | 7645.93 |
| cytochrome c oxidase subunit 3 | PDPJ_1_01232 | Not Available | Negative | 1199448 - 1200323 | 32722.6 |
| cytochrome c oxidase assembly protein ctag | PDPJ_1_01233 | Not Available | Negative | 1200333 - 1200929 | 21632.0 |
| cytochrome c oxidase subunit 1 | PDPJ_1_01234 | Not Available | Negative | 1200939 - 1202555 | 59718.2 |
| cytochrome c oxidase subunit 2 precursor | PDPJ_1_01235 | Not Available | Negative | 1202566 - 1203216 | 24095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

