Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron-encoded protein ltra | PDPJ_1_00117 | Not Available | Negative | 105076 - 105609 | 19713.8 |
| putative diguanylate cyclase yege | PDPJ_1_00118 | Not Available | Negative | 106241 - 108292 | 78006.4 |
| hypothetical protein | PDPJ_1_00119 | Not Available | Negative | 108325 - 108474 | 5619.71 |
| maltose-binding periplasmic protein precursor | PDPJ_1_00120 | Not Available | Negative | 108509 - 109096 | 22469.3 |
| hypothetical protein | PDPJ_1_00121 | Not Available | Positive | 109238 - 109513 | 10458.7 |
| hypothetical protein | PDPJ_1_00122 | Not Available | Positive | 109614 - 109784 | 6485.09 |
| hypothetical protein | PDPJ_1_00123 | Not Available | Negative | 109847 - 110170 | 12248.2 |
| d-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwls precursor | PDPJ_1_00124 | Not Available | Positive | 110558 - 111085 | 19605.0 |
| atp adenylyltransferase | PDPJ_1_00125 | Not Available | Negative | 111151 - 111957 | 30728.8 |
| tyrosine-specific transport protein | PDPJ_1_00126 | Not Available | Negative | 112334 - 113512 | 41490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

