Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01206 | Not Available | Negative | 1172375 - 1172476 | 3691.53 |
| hypothetical protein | PDPJ_1_01207 | Not Available | Positive | 1173010 - 1173378 | 14123.8 |
| putative transposase | PDPJ_1_01208 | Not Available | Positive | 1173501 - 1174595 | 42841.4 |
| guanylate kinase | PDPJ_1_01209 | Not Available | Positive | 1175211 - 1175837 | 23402.8 |
| dna-directed rna polymerase subunit omega | PDPJ_1_01210 | Not Available | Positive | 1175890 - 1176165 | 10134.0 |
| guanosine-3', 5'-bis(diphosphate)3'-pyrophosphohydrolase | PDPJ_1_01211 | Not Available | Positive | 1176184 - 1178289 | 79109.7 |
| trna (guanosine(18)-2'-o)-methyltransferase | PDPJ_1_01212 | Not Available | Positive | 1178388 - 1179098 | 26243.5 |
| atp-dependent dna helicase recg | PDPJ_1_01213 | Not Available | Positive | 1179114 - 1181195 | 77380.7 |
| xanthine permease xanp | PDPJ_1_01214 | Not Available | Positive | 1181500 - 1182906 | 49166.2 |
| osmolarity sensor protein envz | PDPJ_1_01215 | Not Available | Negative | 1183028 - 1184380 | 49945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

