Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | PDPJ_1_01196 | Not Available | Positive | 1165454 - 1165909 | 16102.2 |
| nucleoid occlusion factor slma | PDPJ_1_01197 | Not Available | Positive | 1166112 - 1166702 | 22763.6 |
| orotate phosphoribosyltransferase | PDPJ_1_01198 | Not Available | Negative | 1166778 - 1167419 | 23306.8 |
| ribonuclease ph | PDPJ_1_01199 | Not Available | Negative | 1167551 - 1168267 | 25766.1 |
| hypothetical protein | PDPJ_1_01200 | Not Available | Positive | 1168505 - 1169368 | 32736.3 |
| hypothetical protein | PDPJ_1_01201 | Not Available | Positive | 1169466 - 1169741 | 10458.7 |
| hypothetical protein | PDPJ_1_01202 | Not Available | Positive | 1169790 - 1170011 | 8291.33 |
| sensor protein phoq | PDPJ_1_01203 | Not Available | Positive | 1170274 - 1171317 | 38757.1 |
| hypothetical protein | PDPJ_1_01204 | Not Available | Positive | 1171324 - 1171938 | 23286.4 |
| hypothetical protein | PDPJ_1_01205 | Not Available | Negative | 1172105 - 1172326 | 8291.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

