Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase glpe | PDPJ_1_01166 | Not Available | Negative | 1137633 - 1138073 | 16121.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PDPJ_1_01167 | Not Available | Positive | 1138484 - 1140025 | 55696.9 |
| murein hydrolase activator envc precursor | PDPJ_1_01168 | Not Available | Positive | 1140034 - 1141230 | 44116.2 |
| hypothetical protein | PDPJ_1_01169 | Not Available | Negative | 1141294 - 1141674 | 15003.1 |
| hth-type transcriptional regulator srpr | PDPJ_1_01170 | Not Available | Negative | 1141674 - 1141934 | 9952.66 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | PDPJ_1_01171 | Not Available | Positive | 1142097 - 1143056 | 36836.5 |
| o-antigen ligase | PDPJ_1_01172 | Not Available | Positive | 1143056 - 1144132 | 41199.6 |
| lipooligosaccharide biosynthesis protein lex-1 | PDPJ_1_01173 | Not Available | Positive | 1144243 - 1144992 | 28987.9 |
| gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | PDPJ_1_01174 | Not Available | Positive | 1144995 - 1146077 | 40171.1 |
| hypothetical protein | PDPJ_1_01175 | Not Available | Positive | 1146095 - 1146469 | 14006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

