Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01156 | Not Available | Positive | 1128721 - 1129050 | 12518.3 |
| triosephosphate isomerase | PDPJ_1_01157 | Not Available | Positive | 1129297 - 1130067 | 26960.0 |
| 6-phosphofructokinase isozyme 1 | PDPJ_1_01158 | Not Available | Negative | 1130181 - 1131143 | 34690.1 |
| spheroplast protein y precursor | PDPJ_1_01159 | Not Available | Negative | 1131740 - 1132225 | 18518.4 |
| alkaline phosphatase synthesis transcriptional regulatory protein phop | PDPJ_1_01160 | Not Available | Positive | 1132416 - 1133102 | 25926.5 |
| sensor protein cpxa | PDPJ_1_01161 | Not Available | Positive | 1133102 - 1134463 | 51822.5 |
| trna (cytidine(34)-2'-o)-methyltransferase | PDPJ_1_01162 | Not Available | Positive | 1134557 - 1135021 | 17438.9 |
| serine acetyltransferase | PDPJ_1_01163 | Not Available | Negative | 1135080 - 1135901 | 29275.3 |
| glycerol-3-phosphate dehydrogenase | PDPJ_1_01164 | Not Available | Negative | 1136034 - 1137050 | 35941.2 |
| protein-export protein secb | PDPJ_1_01165 | Not Available | Negative | 1137074 - 1137541 | 17163.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

