Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01136 | Not Available | Negative | 1109719 - 1110204 | 17772.3 |
| hypothetical protein | PDPJ_1_01137 | Not Available | Negative | 1110311 - 1110811 | 18819.4 |
| hypothetical protein | PDPJ_1_01138 | Not Available | Positive | 1110983 - 1111258 | 10458.7 |
| hypothetical protein | PDPJ_1_01139 | Not Available | Positive | 1111307 - 1111510 | 7604.53 |
| hypothetical protein | PDPJ_1_01140 | Not Available | Positive | 1111748 - 1111891 | 5175.46 |
| 50s ribosomal protein l31 | PDPJ_1_01141 | Not Available | Negative | 1111956 - 1112168 | 7760.22 |
| primosomal protein n' | PDPJ_1_01142 | Not Available | Positive | 1112374 - 1114614 | 83309.3 |
| hth-type transcriptional repressor cytr | PDPJ_1_01143 | Not Available | Positive | 1114816 - 1115820 | 36495.2 |
| cell division protein ftsn | PDPJ_1_01144 | Not Available | Positive | 1115987 - 1116856 | 32205.6 |
| group ii intron-encoded protein ltra | PDPJ_1_01145 | Not Available | Negative | 1116883 - 1118193 | 50452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

